Mounting openBIS datasets

Mounting openBIS datasets

RRP projects can access datasets stored in the openBIS server. Selected datasets are mounted directly on the RRP server for read-only access. To specify which datasets should be mounted, add a folder called .rrp to your Git repository. In this folder, add a file called datasets.yaml with the following content:

server-url: "https://openbis-xyz.ethz.ch/"
destinations:
  "input":
      - "20220425184271099-1234"

• server-url is the adress of the openBIS server.
• Under destinations, provide a key-value list of mount folder name(s) and openBIS permIDs for datasets to be mounted by RRP. Thus, in the above example, the openBIS dataset with permID 20220425184271099-1234 will be mounted in the folder openbis/input in the running RRP project.

It is also possible to add datasets to be mounted in the RRP UI once a project has been created, using the Mount tab of the RRP project.